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17-21 November No. 2008.46


 
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From genes to farmers’ fields: waterproof rice set to make waves in South Asia

Delhi, India – “Waterproof” versions of popular varieties of rice, which can withstand 2 weeks of complete submergence, have passed tests in farmers’ fields with flying colors. Several of these varieties are now close to official release by national and state seed certification agencies in Bangladesh and India, where farmers suffer major crop losses because of flooding of up to 4 million tons of rice per year. This is enough rice to feed 30 million people.

The flood-tolerant versions of the “mega varieties”—high-yielding varieties popular with both farmers and consumers that are grown over huge areas across Asia—are effectively identical to their susceptible counterparts but recover after severe flooding to yield well.

An early November tour of research stations and farms in Bangladesh and India led by David Mackill, IRRI senior rice breeder, marked the successful completion of a project, From genes to farmers’ fields: enhancing and stabilizing productivity of rice in submergence-prone environments, funded for the past 5 years by Germany’s Federal Ministry for Economic Cooperation and Development (BMZ). The tour culminated with a 1-day wrap-up workshop at the Central Rice Research Institute (CRRI) in Cuttack, India, 7 November (photo above).

The new varieties were made possible following the identification of a single gene that is responsible for most of the submergence tolerance. Thirteen years ago, Dr. Mackill, then at the University of California (UC) at Davis, and Kenong Xu, his graduate student, pinpointed the gene in a low-yielding traditional Indian rice variety known to withstand flooding. Xu subsequently worked as a postdoctoral fellow in the lab of Pamela Ronald, a UC Davis professor (in photo below inspecting a flood-tolerant variety on the Rangpur station of the Bangladesh Rice Research Institute), and they isolated the specific gene—called Sub1A—and demonstrated that it confers tolerance to normally intolerant rice plants. Dr. Ronald’s team showed that the gene is switched on when the plants are submerged.

A geneticist from UC Riverside, Julia Bailey-Serres, is leading the work to determine exactly how Sub1A confers flood tolerance. “Sub1A effectively makes the plant dormant during submergence, allowing it to conserve energy until the floodwaters recede,” she said.

Typically, rice plants will extend the length of their leaves and stem in an attempt to escape submergence. The Sub1A gene is an evolutionarily new gene in rice found in only a small proportion of the rice varieties originating from eastern India and Sri Lanka. The activation of this gene under submergence counteracts the escape strategy. continued

See Photos and Videos of the Week further below in the right-hand column for additional background on this work. Click here  and here to access a seven-part report on Pamela Ronald's blog, Tomorrow's Table. Click here for more info on Sub1 on the IRRI Web site.
 

India-Africa conference tackles sustainable food security

The India-Africa Conference on Cooperation for Sustainable Food Security, jointly organized by the Government of India, the Indian Council for Agricultural Research (ICAR), and the Indian Farmers Fertilizer Cooperative (IFFCO), was held on 10-12 November at the NASC Complex, Pusa, New Delhi.

The participants included ministers, policymakers, farmers, scientists, and private-sector representatives from India and selected African countries.
To mark the occasion, an exhibit highlighted developments in Indian agriculture, focusing on India-Africa collaborative efforts in the food sector. The IRRI-India office put up a booth showcasing IRRI-Africa collaboration in the fight against hunger and poverty.

The IRRI exhibit showed the involvement of IRRI in Africa since the 1970s and its collaboration with the Africa Rice Center (WARDA), national agricultural research and extension systems of East and Southern Africa (ESA), and the Instituto de Investigação Agrícola de Moçambique (IIAM) to help farmers in the region grow new rice varieties, learn modern production techniques, and address productivity constraints. Collaboration between IRRI and WARDA in the ESA region focused on rice breeding, varietal release, seed production systems; crop production and postharvest practices; rice value chain and agricultural policy; and rice production improvement at the village level.

IRRI’s program on Africa involves the
introduction and evaluation of improved rice varieties from IRRI, WARDA, and other research centers in Africa; and the country-specific evaluation and release of new varieties for local producers in Ethiopia. A new initiative led by IRRI and WARDA aims to develop climate-hardy rice tailored to several rice-producing countries on the continent.

Conference participants identified high-priority collaborative activities to further strengthen India-Africa partnership with IRRI assistance. They likewise discussed issues related to rice cultivation in India. Various resource-conserving technologies for rice and wheat developed by the Rice-Wheat Consortium were also demonstrated.

For more details, contact Dr. Sheetal Sharma in the IRRI-India Office.
 

Researchers learn about writing better scientific papers

Nineteen IRRI staff members and scholars participated in the Scientific Writing Workshop held last 11-14 November at the Activity Room, Swaminathan Hall, Training Center. CPS editor Tess Rola handled the course, with assistance from Maria Angeli Maghuyop, TC training specialist.

The 4-day workshop aimed to help scientists and researchers develop skills in written communication and make them more effective in sharing their research results. Furthermore, participants learned about the process of organizing and writing a scientific paper and having these published in international journals.

This course highlighted the fact that the responsibility of a scientist does not end after the completion of laboratory and field investigations. Results must be properly conveyed to the scientific community, donor organizations, policymakers, and potential users. Only then can the scientist claim to have made a real contribution to the existing body of scientific knowledge. The information, if communicated well, would capture the reader’s interest and has a greater chance of reaching its audience. Scientists must have the relevant skills that enable them to make effective written presentations that communicate information clearly and concisely.

The methods used in the workshop were lectures, discussions, and practice exercises. One major output of the workshop was a working draft of the scientific paper that each participant is currently working on.
 

Management memos

DG memo on IFEA Elections
18 November 2008

We are pleased to announce that the IRRI Filipino Employees Association (IFEA) has scheduled the election of its Board of Representatives for 26 November 2008. The election shall be conducted from 8:00 a.m. to 12:00 noon at Sallimels Canteen. IFEA has created an Election Committee, comprising the following individuals, to oversee the election process: Ramon Oliveros (chair) and members Carlos Huelma, Zenaida Pascual, Priscilla Comia, and Melencio Lalap

This Election Committee will post and e-mail announcements pertaining to the 2008 IFEA election in the coming days. The IRRI management team fully supports this important activity, and all IRRI Los Baños–based nationally recruited staff are encouraged to participate in the election. All OU heads are requested to provide employees with the opportunity to proceed to the polling place and cast their vote.

Thank you.

Robert Zeigler



Office of the DDG-R

4 November 2008

To: B. Bouman, S. Mohanty, D. Brar, R. Buresh, D. Johnson, R. Wassmann, S. Peng,
E. Humphreys, S. Savary, F. Horgan, K. Kajisa, T. Metz, T. Clemeno
From: A. Dobermann
Subj:  IRRI Long-Term Studies Committee (LTSC)

I would like to invite you to be members of the IRRI Long-Term Studies Committee (LTSC), with the DDG-R as chair. The rationale for creating the LTSC is that IRRI conducts a number of long-term studies, including long-term experiments conducted at IRRI and partner institutions, as well as various social science studies such as the loop surveys conducted in Laguna and Central Luzon. These studies provide international public goods of strategic and unique nature, a role that IRRI must continue to play. Likewise, new medium- and long-term studies need to be designed to tackle emerging issues in a multidisciplinary manner. This will also require designing new mechanisms for managing and funding of such work.

Proposed terms of reference:
1. Develop a long-term strategy, business plan, and fund-raising/financing strategy for managing all long-term studies conducted by different research groups in IRRI, with particular emphasis on ensuring interdisciplinary research and staffing.

2. Design and oversee the implementation of new interdisciplinary long-term studies at field and landscape levels to address critical emerging issues, with particular emphasis on drivers of change such as climate, water, and socioeconomics, and encourage embedding short-term studies to add value.

3.  Ensure high-quality standards in conducting long-term studies, data management, data analysis, and reporting.

4. Design an effective data management system that enables wide access to long-term data by users in and outside IRRI.

5. Develop an effective publication and communication strategy on results (interpretations) and data from the long-term studies.

6. Provide information and guidance for strategic research planning on emerging issues in rice systems.Thank you for accepting this important assignment.


                                                                      ***

18 November 2008

Rumors are already spreading about plans for a change in IRRI's research management structure. This is to confirm that we are indeed starting to explore such possible changes. Several recent developments and our overall vision for the future suggest that we should creatively think about any potential improvements that can be made in the efficiency of our research and the supporting management structures and processes. We have entered a phase of rapid growth, driven by an increasing amount of restricted funding, including many new projects supported by non-CGIAR donors. This presents huge new opportunities for strengthening IRRI and increasing its impact for addressing major development challenges. It will also change the pace of our work. Hence, it is imperative that we continue to evaluate ourselves and seek out all opportunities for being most efficient in managing our R&D work.
 
As a first step, a general model for a more decentralized, product-oriented research structure was presented and discussed during the IPC meeting on Thursday. The general agreement was to further pursue these initial ideas and, through a more detailed analysis, develop a full proposal for a new research program and management structure, including the required changes in key support services.
 
As a next step, a small task force composed of Hei Leung, Dave Mackill, Bas Bouman, Ruaraidh Sackville-Hamilton, Samarendu Mohanty, and me will meet in early December to further develop this plan. It is our goal to share it for discussion with all IRRI staff in mid-January.
 
Achim Dobermann
 

Beth Johnson passes away

Harwant Khush reports that Beth Johnson, spouse of Stan Johnson, IRRI agricultural economist (1966-68), passed away in her sleep on 3 November.

She was very active in the IRRI Reunion at Davis in June 2006 during which she participated in Gene Hettel's ongoing IRRI pioneer interviews (center in photo with husband Stan and friend Carolyn Moomaw Wilhelm). She was a good friend always with a positive attitude. This is very unexpected news and our sympathies go out to Stan and family. We have no news of the funeral arrangements. Friends can contact Stan at his email address: 
Stanj662@aol.com
 

IRRI FC kicks grass at the Alaska Cup 2008

The IRRI Football Club (IRRI FC) joined the 13th Alaska Football Cup, last Sunday 16 November) at the Alabang Country Club Football Field, Ayala Alabang. Various schools and football clubs from all over the Philippines participated in the country’s largest and most prestigious annual football tournament.

The ladies' team (in photo with the men) was composed of IRRI staff Ranee Mabesa, Reena Sellamuthu, Mary Burac, Sarah Beebout (CESD), Darlene Sanchez, Sheryl Sierra, Rona Andam (PBGB), Mae Merluza (GRC), Clerisse Ramos (RMQA), and reinforcements Mutya Aller, Dens Detera and Mildred Mejino.

The ladies were grouped with Los Borrachos, Alabang Grins, Pampanga Agricultural College FC, Brent IS – Subic, and Makati FC in the Ladies' Open Division.

The Alabang Grins eventually won the group stage and moved on to the advanced stages of the competition. Mutya Aller, Mae Merluza, and Sarah Beebout (shown defending in photo right) contributed one goal each in their campaign.

The men's team (in photo with the women) was composed of Kofi Bimpong, Reza Mohammadi (PBGB), Tanguy Lafarge, Mervin Manalili (CESD), Anthony Telosa (GRC) and Kenneth Ortiz (Lazaga). Enrico Mercado (formerly from PBGB), Jojo Telosa (brother of Anthony), Bayani Vandenbroek, Joey and Alvin (from Canlubang) completed the lineup.

IRRI FC, Pampanga Agricultural College FC, Kaya FC, San Jose del Monte FC Xavier Alumni FC completed bracket C of the Men's Open Division.

The men's team managed to sneak in one win before bowing out of the group stage. Tanguy Lafarge (photo left) and Bayani Vandebroek both scored goals for the team.

The backup forces and friends who came to cheer the team were Sheila Quilloy (GRC), Vivay Salazar (CRIL), EJ Azucena (ISAAA), Jelo Magat (FOP), Bill Sta. Clara (CPS), Boggs Panaligan (formerly from CPS), and Ems Caceres. Lorraine Cappleman (PBGB) was the overall coordinator for both teams. Transportation was provided by CERS.
 

Badminton standings as of 17 November

 

 

 

 

 

Team

W

L

 

 

Green

40

28

 

 

 

 

  

 

 

 Blue

36

32

 

 

 

 

  

 

 

Yellow

32

36

 

 

 

 

 

 

 

Red

28

40

 

 

 

 

 

 

 


Click here (or click individual stories below) to view news and features of the past week and earlier about rice from Web sites worldwide. The 3,600-story database is now searchable going back to June 2005. Give it a try!

Click here to access a historic listing of 390 (299 since January 2007) newspaper and magazine articles and features, audio and video clips, and external Web sites dating back to 14 June 1968, which feature IRRI staff and rice research.




Click here
to read about news and events at the TC via its Web site.


NEWS ALERT

Click here (intenal campus only) to read news and feature stories and see more about what's new via the DPPC Web site. 

 

Last week (13 November)

One year of seeding and seven years of weeding

by David Johnson, senior weed scientist and CURE coordinator

Farmers make large investments in time and money in controlling weeds and yet they remain a major cause of crop losses. Integrated weed management is often used by farmers to control weeds and cultural measures often make an important contribution to this. A greater understanding of weed ecology would help us strengthen farmers’ defenses against losses caused by weeds. Click here to listen to the audio of his seminar and click here to follow along with his PowerPoint.

This week (20 November)  
Public-private sector partnerships for bringing new technologies to farmers
by Achim Dobermann, DDG-R

IRRI needs to expand its efforts to faster deliver better technologies to more rice farmers. To do this, the Institute needs to develop new partnerships with NGOs and the private sector. This seminar will provide an overview of delivery systems proposed in the Cereal Systems Initiative for South Asia (CSISA), a new umbrella for using science and technologies to accelerate short- and long-term cereal production growth in South Asia’s most important grain baskets.

Note to Thursday Seminar presenters: Since Thursday seminar presentations are receiving  more exposure via the new beta.irri.org Web site under "Science Talks," please make sure there are no slides in your PowerPoint file that you would prefer not to be available to the general public. If the presentation as given needs some adjustment because of this, please put a revised PowerPoint file in Gene Hettel's T: drive folder and send him a note about it before the following Tuesday after the presentation. 

How NOT To Use PowerPoint
by Comedian Don McMillan: YouTube

Nearly 100 past Thursday and other special seminars (since 26 May 2005) have been archived on the K:drive at K:/IRRIThursdaySeminars. PowerPoint files are included for all of these seminars, with audio files (to follow along) available for most of them. A new site for easier access to these archived seminars, along with a synopsis of each, is also under development.

 

Minding safety--November feature

Once a month, SSS provides information, reminders, tips, instructions, and advice from lessons learned involving safety, security, health, and the environment. Click here to view the November PowerPoint issue of Minding Safety.

Because our Institute has different divisions, units, laboratories, and headhouses with respective responsibilities, we all know that safety is not limited to SSS alone. SAFETY IS EVERYBODY’S RESPONSIBILITY. What we would like to do is establish a way of imparting our research to you, to help you internalize this knowledge so that you too start MINDING SAFETY.

 

17 November: 2000, To mark the 40 years of strong partnership between the Institute and Thailand, the IRRI Liaison Office in Bangkok sponsors and kicks off 2 days of events in the country.

18 November: 2004, In celebration of the International Year of Rice 2004, Host Country Day held at IRRI attracts approximately 125 officials from various branches of the Philippine Government.

19 November: 2005, More than 700 rice scientists and researchers from 20 countries arrive for the 5-day 5th International Rice Genetics Symposium at the EDSA Shangri-la Hotel in Manila, which is the largest scientific meeting that IRRI has ever hosted in the Philippines. Click here to access information about obtaining the e-Proceedings.

21November: 2000, The Cambodian Agricultural Research and Development Institute (CARDI) in Phnom Penh is inaugurated, which is the fruit of many years of work involving the Cambodia-IRRI-Australia Project (CIAP).

22 November: 2002, J.K. Ladha, soil nutritionist, is named a fellow of the American Society of Agronomy (ASA) and Sant Virmani, plant breeder, receives the International Service in Crop Science Award from the Crop Science Society of America (CSSA).

Click here to view significant dates throughout the calendar year. Click here for the entire year in one pdf file. If you have some dates to add or correct, please contact Gene Hettel.

 

Library corner

Ismail, A.M., Ella, E.S., Vergara, G.V., Mackill, D.J.  Mechanisms associated with tolerance to flooding during germination and early seedling growth in rice (Oryza sativa). Ann. Bot. 2008 (e-first): 13 p. 2008. DOI: 10.1093/aob/mcn211  


Rice literature alert (internal campus access only using Internet Explorer)
(to search the rice database, please click here)


Useful electronic resources

HathiTrust

HathiTrust is a digital repository for the United States’ great research libraries, bringing together the immense collections of  13 universities of the Committee on Institutional Cooperation and the University of California system. HathiTrust is currently experimenting with large-scale full-text searching as part of an effort to create a mechanism to search across the entire repository. As an initial public beta of full-text search functionality.  Currently available is a simple mechanism to search across all of the fully viewable works (both those in the public domain and those for which permission is required) and a sprinkling of search-only works (i.e., in-copyright works where the text of the work is not accessible).  The size of the content indexed is approximately 500,000 volumes, and the majority of the works are fully viewable.

 

UNESCO resources on information literacy
This is a blog site that offers free links to full-text publications on information literacy.

WorldWideScience.org
This is a global science gateway—accelerating scientific discovery and progress through a multilateral partnership to enable federated searching of national and international scientific databases and portal.
 

Table of contents alerts
(for nonsubscribed items only; to search a specific journal title, click here;
for electronic journals, click here)

Agricultural Water Management, v. 95, no. 12, 2008
Applied Biochemistry and Biotechnology, v. 151, no. 2/3, 2008
Australian Journal of Agricultural Research, v. 59, no. 12, 2008
Australian Journal of Experimental Agriculture, v. 48, no. 12, 2008
Biochemical Systematics and Ecology, v. 36, no. 10, 2008
Carbohydrate Research, v. 343, no. 18, 2008
Critical Reviews in Microbiology,  v. 34, no. ¾, 2008
Culture and Organization, v. 14, no. 4, 2008
European Journal of Agronomy, v. 30, no. 1, 2009
Food Biotechnology, v. 22, no. 4, 2008
Gene, v. 427, no. ½, 2008
Journal of Plant Nutrition, v. 31, no. 12, 2008
Oxford Development Studies, v. 36, no. 4, 2008
Trends in Genetics, v. 24, no. 11, 2008
Virology, v. 382, no. 1, 2008

Open-access journals
Journal of Water Science, v. 21, no. 4, 2008

Library survey 2008

In the recent survey of library services, suggestions for improvement of LDS services were solicited from respondents via question no.13:   
What improvements (or even new services) would you like to see? We welcome your suggestions and comments.

 

We received 83 suggestions. To see the suggestions and comments to the last batch, nos. 71-83, and the LDS replies, please go to  http://ricelib.irri.cgiar.org/screens/suggest.html

 
  Agronomy position available

The Charles Sturt University in Wagga Wagga, NSW Australia is seeking a motivated candidate for the position of Lecturer/Senior Lecturer in Agronomy. 

Further details are available at
www.csu.edu.au/jobs - position number 111810 - full-time academic position.  Please pass this notice to those who may be interested.

 


World Grains Trade Summit in Singapore, 17-18 February 2009

 

The theme for this 2-day event is “How is the regional business evolving amid volatile supplies & changing climate?
 

Key issues to be covered will include global grain market outlook and where it is heading; can the biofuel mandate roll back with rising food prices; agriculture policy and investment outlook; will the center of commodity exchange shift to Asia; commodity price risk management; freight markets and impact on grain movement.

 

The contact person is Hafizah Adam (hafizah@cmtsp.com.sg; +65 63469218). Click here for more information on the event Web site.
 


Call for classic rice papers by IRRI staff

As part of the materials being prepared for IRRI’s 50th anniversary celebration in 2010, we would like to put together a set of the classic rice science papers published by IRRI scientists that have helped to change the world or the way we are doing things today. Since many younger (or future) scientists have probably never read some of these classic papers, we would like to publish online as many of them as we can (if we can get permission from the various publishers to do so).

As a starting point, we would like you to help us identify these rice papers in your respective disciplines written during three specific time periods:
a) The early days and discoveries (1960-75),
b) The period of rapid growth in rice science and rice production (1976-90),
c) Recent years and the new areas that have changed our science (since 1991).

Please focus on selecting truly innovate works, that is, seminal pieces of research and thinking, and try to nominate 1 or 2 papers in each of the three categories shown above. We’ll assign a task force to select perhaps the top 15-30 (5-10 for each period).

Please send your nominations (authors, title, journal, and date published, along with an electronic file of the paper if you happen to have it available) to Gene Hettel in CPS by 30 November 2008.
 


Beta.irri.org on line for feedback

Over the past few months, the Institute has been working hard to develop and launch a new Web site for IRRI--no mean feat. Thanks to the efforts of CPS staff, we are now launching a beta version of the site, or work in progress. If you have an opportunity, take a look at http://beta.irri.org. Please send any welcomed feedback to the Web community manager, Albert Borrero.


Information about AuthorAID

AuthorAID is a pioneering program based at the International Network for the Availability of Scientific Publications (INASP). It is supported by the Swedish International Development Cooperation Agency (SIDA) and the UK Department for International Development (DFID). This new Web site has been developed in conjunction with the Institute of Learning and Research Technology at the University of Bristol, UK.

AuthorAID helps researchers in developing countries to publish and otherwise communicate their work. It also serves as a wider global forum to discuss and disseminate research.

Keys features and benefits of AuthorAID are

1. A community space for discussion and questions where researchers can benefit from advice and insights from members across the globe.

2. Access to a range of documents and presentations on best practice in writing and publication and worldwide training workshops on scientific writing.

3. Resources and advice on best practice towards identifying, writing, and then submitting successful proposals for research funding.

4. A chance to network with other researchers.

5. Personal mentoring by highly published researchers and professional editors.

Register now to take advantage of these benefits. Click here for an example.

  

 
Travel Advisory
 -Australia
 -Canada
 -USA
 -United Kingdom
International Travel and Health
 
IRS Position Vacancies
NRS Position Vacancies
CGIAR Center Position Vacancies
 
Manila Forecast
Asia Forecast
 
 

Access to almost all of IRRI's scientific books is now in full-view mode at Google Book Search. The PDF download capability has also been activated for many of the titles--give it a try!

     

Click on the Google logo above and take a look around and experiment with the various features.

 


Photos
and Videos
of the Week


Sub1 harvest in Bangladesh,
by Adam Barclay, CPS

IRRI and University of California  (Davis and Riverside) researchers ceremoniously harvest rice with the Sub1 flood tolerance gene on the Rangpur station of the
Bangladesh Rice Research Institute (BRRI) recently.  Click here to watch a 1:42 video clip by Gene Hettel.
 

The women's point of view,
by Gene Hettel, CPS

IRRI and University of California researchers (in front from left, Sigrid Heuer, Julia
Bailey-Serres, and Pamela Ronald) pose with women and their children in Harir Danga village in north-western Bangladesh near Rangpur. The researchers had just discussed the women's views on the the flood-tolerant Sub1 rice varieties being planted in their village's nearby fields. Click here to view a 3:51 video clip that shows some of the interaction.

See lead story about this waterproof rice in today's Bulletin above.