Journal articles

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Aganchich B, Wahbi S, Wakrim R, Serraj R. 2007. Plant growth and water relations of two olive varieties (Olea europea L.) subjected to partial root drying (PRD) and regulated deficit irrigation (RDI). Plant Biosyst. 141 (2): 252-264.

Ali MA, Ladha JK, Rickman J, Lales JS. 2007. Nitrogen dynamics in lowland rice as affected by crop establishment and nitrogen management. J. Crop Improv. 20 (2): 89-105.

Alvare LM, Shelton P, Ramos MM, Ferreyra C, Walczak N. 2007. Enhancing access to global agricultural research information: the CGIAR virtual library project. Q. Bull. Int. Assoc. Agric. Inf. Spec. 52(3/4): 83-90.

Ammar MHM, Monir Samah, Singh RK, Mohapatra T, Singh NK. 2007. Diversity analysis of rice varieties differing in salt-tolerance. Egyptian J. Plant Breed. 11(2): 543-550.

Ammiraju JSS, Zuccolo A, Yu Y, Song XA, Piegu B, Chevalier F, Walling JG, Ma JX, Talag J, Brar DS, San Miguel PJ, Jiang N, Jackson SA, Panaud O, Wing RA. 2007. Evolutionary dynamics of an ancient retrotransposon family provides insights into evolution of genome size in the genus Oryza. Plant J. 52(2): 342-351.

An G, Leung H, Sasaki T, Zhang Q, editors. 2007. Rice functional genomics in Asia. Plant Mol. Biol. 65(4): 357-570.

Arthur AD, Pech RP, Singleton GR. 2007. Cross-strain protection reduces effectiveness of virally vectored fertility control—results from individual-based, multi-strain models. J. Appl. Ecol. 44: 1252-1262.

Balasubramanian V, Sie M, Hijmans RJ, Otsuka K. 2007. Increasing rice production in sub-Saharan Africa: challenges and opportunities. Adv. Agron. 94: 55-133. DOI: 10.1016/S0065-2113(06)94002-4.

Bandyopadhyay A, Datta K, Zhang J, Yang W, Raychaudhuri S, Miyao M, Datta SK. 2007. Enhanced photosynthesis rate in genetically engineered indica rice expressing pepc gene cloned from maize. Plant Sci. 172(6): 1204-1209.

Belder P, Bouman BAM, Spiertz JHJ. 2007. Exploring options for water savings in lowland rice using a modelling approach. Agric. Syst. 92: 91-114.

Bernier J, Kumar A, Ramaiah V, Spaner D, Atlin GN. 2007. A large-effect QTL for grain yield under reproductive-stage drought stress in upland rice. Crop Sci. 47: 505-518.

Bhatnagar-Mathur P, Jyostna-Devi M, Reddy DS, Lavanya M, Vadez V, Serraj R, Yamaguchi-Shinozaki K, Sharma KK. 2007. Stress-inducible expression of Arabidopsis thaliana DREB1A in transgenic peanut (Arachis hypogaea L.) improves transpiration efficiency under water limiting conditions. Plant Cell Rep. 26: 2071–2082.

Bhushan L, Ladha JK, Gupta RK, Singh S, Tirol-Padre A, Saharawat YS, Gathala M, Pathak H. 2007. Saving of water and labor in rice-wheat system with no-tillage and direct-seeding technologies. Agron. J. 99: 1288-1296.

Boling AA, Bouman BAM, Tuong TP, Murty MVR, Jatmiko SY. 2007. Modelling the effect of groundwater depth on yield-increasing interventions in rainfed lowland rice in Central Java, Indonesia. Agric. Syst. 92: 115-139.

Bonman JM, Bockelman HE, Jin Y, Hijmans RJ, Gironella A. 2007. Geographic distribution of stem rust resistance in wheat landraces. Crop Sci. 47: 1955-1963. DOI: 10.2135/cropsci2007.01.0028

Borrero A, Ramos M, Arsenal A, Lopez K, Hettel G. 2007. Scholarly publishing initiatives at the International Rice Research Institute: linking users to public goods via open access. First Monday 12(10): Online journal

Bouman BAM. 2007. A conceptual framework for the improvement of crop water productivity at different spatial scales. Agric. Syst. 93: 43-60.

Bouman BAM, Feng L, Tuong TP, Lu G, Wang H, Feng Y. 2007. Exploring options to grow rice using less water in northern China using a modelling approach. II: Quantifying yield, water balance components, and water productivity. Agric. Water Manage. 88: 23-33.

Bouman BAM, Humphreys E, Tuong TP, Barker R. 2007. Rice and water. Adv. Agron. 92: 187-237.

Bouman BAM, van Laar HH. 2006. Description and evaluation of the rice growth model ORYZA2000 under nitrogen-limited conditions. Agric. Syst. 87: 249-273.

Bousquet F, Castella JC, Trebuil G, Barnaud C, Boissau S, Kam SP. 2007. Using multi-agent systems in a companion modelling approach for agroecosystem management in Southeast Asia. Outlook Agric. 36(1): 57-62.

Brown PR, Huth NI, Banks PB, Singleton GR. 2007. Relationship between abundance of pest rodents and damage to agricultural crops. Agric. Ecosyst. Environ. 120: 405-415.

Burgueno J, Crossa J, Cornelius PL, Trethowan R, McLaren G, Krishnamachari A. 2007. Modeling additive × environment and additive × additive × environment using genetic covariances of relatives of wheat genotypes. Crop Sci. 47: 311-320.

Carisse O, Rolland D, Talbot B, Savary S. 2007. Heterogeneity of the aerial concentration and deposition of ascospores of Venturia inaequalis within a tree canopy during the rain. Eur. J. Plant Pathol. 117: 13-24.

Castillo E, Tuong TP, Ismail AM, Inubushi K. 2007. Response to salinity in rice: comparative effects of osmotic and ionic stresses. Plant Prod. Sci. 10: 159-170.

Chhokar RS, Sharma RK, Jat GR, Pundir AK, Gathala MK. 2007. Effect of tillage and herbicide on weeds and productivity of wheat under rice-wheat growing system. Crop Prot. 26: 1689-1696.

Chin JH, Kim JH, Jiang WZ, Chu SH, Woo MO, Han LZ, Brar DS, Koh HJ. 2007. Identification of subspecies-specific STS markers and their association with segregation distortion in rice (Oryza sativa L.). J. Crop Sci. Biotechnol. 10(3): 175-184.

Cho YI, Jiang WZ, Chin JH, Piao ZZ, Cho YG, McCouch SR, Koh HJ. 2007. Identification of QTLs associated with physiological nitrogen use efficiency in rice. Mol. Cells 23(1): 72-79.

Choudhury BU, Bouman BAM, Singh AK. 2007. Yield and water productivity of rice-wheat on raised beds at New Delhi, India. Field Crops Res. 100: 229-239.

Chu HY, Hosen Y, Yagi K. 2007. NO, N₂O, CH₄, and CO₂ fluxes in winter barley field of Japanese Andisol as affected by N fertilizer management. Soil Biol. Biochem. 39: 330-339.

Collard BCY, Das A, Virk PS, Mackill DJ. 2007. Evaluation of ‘quick and dirty’ DNA extraction methods for marker-assisted selection in rice (Oryza sativa L.). Plant Breed. 126: 47-50.

Datta SK, Datta K, Parkhi V, Rai M, Baisakh N, Sahoo G, Rehana S, Bandyopadhyay A, Alamgir M, Ali MS, Abrigo E, Oliva N, Torrizo L. 2007. Golden rice: introgression, breeding, and field evaluation. Euphytica 154(3): 271-278.

Diaz MGQ, Ryba M, Leung H, Nelson R, Leach JE. 2007. Detection of deletion mutants in rice via overgo hybridization onto membrane spotted arrays. Plant Mol. Biol. Rep. 25(1/2): 17-26.

Du PV, Cabunagan RC, Cabauatan PQ, Choi HS, Choi IR, Chien HV Huan NH. 2007. Yellowing syndrome of rice: etiology, current status and future challenge. Omonrice 15: 94-101.

Dwivedi SL, Crouch JH, Mackill DJ, Xu Y, Blair MW, Ragot M, Upadhyaya HD, Ortiz R. 2007. The molecularization of public sector crop breeding: progress, problems and prospects. Adv. Agron. 95: 163-318.

Ebrayi KN, Pathak H, Kalra N, Bhatia A, Jain N. 2007. Simulation of nitrogen dynamics in soil using InfoCrop model. Environ. Monit. Assess. 131: 451-465.

Faedo M, Hinds LA, Singleton GR, Rawlinson WD. 2007. Prevalence of mouse mammary tumor virus (MMTV) in wild house mice (Mus musculus) in southeastern Australia. J. Wildlife Dis. 43: 688-674.

Feng L, Bouman BAM, Tuong TP, Lu G, Wang H, Feng Y. 2007. Exploring options to grow rice using less water in northern China using a modelling approach. I. Field experiments and model evaluation. Agric. Water Manage. 88: 1-13.

Fu BY, Xiong JH, Zhu LH, Zhao XQ, Xu HX, Gao YM, Li YS, Xu JL, Li ZK. 2007. Identification of functional candidate genes for drought tolerance in rice. Mol. Genet. Genomics 278(6): 599-609.

Fujita D, Santos RE, Ebron L, Yanoria MJT, Kato H, Kobayashi S, Uga Y, Araki E, Takai T, Fukuta Y, Kobayashi N. 2007. Genetic and breeding study on near-isogenic lines of IR64 for yield-related traits—QTL analysis for days to heading in early heading lines. Breed. Res. 9 (extra 1): 114.

Fujita D, Santos RE, Ebron L, Yanoria MJT, Kato H, Kobayashi S, Uga Y, Araki E, Takai T, Fukuta Y, Kobayashi N. 2007. Genetic and breeding study on near-isogenic lines of IR64 for yield-related traits—analysis of genotype using SSR markers. Breed. Res. 9 (extra 1): 300.

Fukuta Y, Ebron LA, Kobayashi N. 2007. Genetic and breeding analysis of blast resistance elite indicatype rice (Oryza sativa L.) bred at the International Rice Research Institute. JARQ (Jpn. Agric. Res. Q.) 41(2): 101-114.

Furukawa Y, Hasegawa Y. 2007. Economic evaluation of kitchen garbage recycling with biogas plants. J. Organic Agric. Res. 6: 153-156.

Gosme M, Willocquet L, Lucas P. 2007. Size, shape and intensity of aggregation of take-all disease during natural epidemics in second wheat crops. Plant Pathol. 56: 87-96.

Gupta RK, Singh Y, Ladha JK, Singh B, Singh J, Singh G, Pathak H. 2007. Yield and phosphorus transformations in a rice-wheat system with crop residue and phosphorus management. Soil Sci. Soc. Am. J. 71: 1500-1507.

Hafeez MM, Bouman BAM, Van de Giessen N, Vlek P. 2007. Scale effects on water use and water productivity in a rice-based irrigation system (UPRIIS) in the Philippines. Agric. Water Manage. 92: 81-89.

Hairmansis A, Yanoria MJT, Kobayashi N, Fukuta Y. 2007. Chromosome components of near-isogenic lines with Japonica type genetic background for blast resistance in rice (Oryza sativa L.). Breed. Res. 9 (extra 1): 61.

Han LZ, Qiao YL, Zhang SY, Zhang YY, Cao GL, Kim JH, Lee KS, Koh HJ. Identification of quantitative trait loci for cold response of seedling vigor trait in rice. J. Genet. Genomics 34(3): 239-246.

He F, Huang J, Cui K, Zeng J, Xu B, Peng S, Buresh RJ. 2007. Effect of real-time and site-specific nitrogen management on rice yield and its quality. Sci. Agric. Sin. 40(1): 123-132.

Heong KL, Manza A, Catindig J, Villareal S, Jacobsen T. 2007. Changes in pesticide use and arthropod biodiversity in the IRRI research farm. Outlooks Pest Manage. 18(5): 229–233.

Hijmans RJ, Gavrilenko T, Stephenson S, Bamberg J, Salas A, Spooner DM. 2007. Geographic and environmental range expansion through polyploidy in wild potatoes (Solanum section Petota). Global Ecol. Biogeogr. 16: 485–495. DOI: 10.1111/j.1466-8238.2007.00308.x

Hossain M. 2007. Technological progress for sustaining food-population balance: achievement and challenges. Agric. Econ. 37(suppl. 1): 161-172.

Hu R, Cao J, Huang J, Peng SB, Huang J, Zhong X, Zou Y, Yang J, Buresh RJ. 2007. Farmer participatory testing of standard and modified site-specific nitrogen management for irrigated rice in China. Agric. Syst. 94:331-340.

Hubbart S, Peng S, Horton P, Chen Y, Murchie EH. 2007. Trends in leaf photosynthesis in historical rice varieties developed in the Philippines since 1966. J. Exp. Bot. 58: 3429-3438.